PCR Analysis of Tail DNA: Difference between revisions

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see [[Genotyping Details]] for strain specific details
see [[Genotyping Program]] for strain specific details


==Materials==
==Materials==
# Dream Taq Green master mix
# Specific gene Primers (0.4um Working stock)
# Tail digest DNA
# ddH2O


==Protocol==
==Protocol==
First, make 250ul of 0.4um working stock primers from 100um Primary Stocks.
#248 ul ddH20
#1ul forward primer (100um)
#1ul reverse primer (100um)


Use the following Volumes per Reaction:


Buffer: 4 uL of 5X Go-Taq buffer ("Molecular Biology Stuff" box in freezer)
Use the following Volumes per 25ul Reaction:


Forward Primer: .4ul
Per sample (1X)
#Dream Tag Master mix: 12.5uL ("Molecular Biology Stuff" box in freezer)
#0.4um Primer Mix: 5ul
#Sterile ddH2O: 7.5ul


Reverse Primer: .4ul
*Template: 1 uL


dNTPs: .4uL of 2 mM ("Molecular Biology Stuff" box in freezer)
Sterile water: 13.6 uL


Polymerase Go-Taq: 1 uL (6th floor in Genotype Yellow Box in freezer)  
Run "specfic" PCR Program for gene of interest (approx 2 hours).


Template: 1 uL
*[[Genotyping Program]]
*[[PCR Amplification of DNA]]


see [[Preparing an Agarose Gel]] for details on preparing a DNA gel


see [[Preparing an Agarose Gel]] for details on preparing a DNA gel
[[Category: Genotyping]]
[[Category: Mouse Work]]