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→Differential Expression Analysis
*First define groups for each treatment. If a samplesheet was provided correctly and had this information:
<pre>samples = pData(BSData)$Sample_Group</pre>
*Otherwise define these groups manually in the order that they were entered (, check by looking at pData(BSData)
<pre>samples = c("Control", "Control", "Treatment1", "Treatment1, "Treatment2"...)</pre>
*Next the groups are used to set up a statistical design: