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Analysing Data on Armis or Great Lakes using Rmd Files

751 bytes added, 16:55, 10 July 2023
Added details about making a symlink
=== Accessing the Server - Command Line ===
 
On OSX open a terminal and enter <code>ssh <UNIQNAME>@armis2.arc-ts.umich.edu</code> replacing with your uniqname. Enter your level 1 password. Authenticate using Duo following the instructions. You will be placed in your home folder. Your data should be in <code>/nfs/turbo/precision-health/DataDirect/<YOUR-IRB></code>. I find it convenient to make symlinks to quickly navigate to your data folder so first find your folder name
 
<code>ls /nfs/turbo/precision-health/DataDirect/</code>
 
locate the name of your folder <FOLDER_NAME>
 
create the symlink
 
<code>ln -s /nfs/turbo/precision-health/DataDirect/<FOLDER_NAME> <LINK_NAME></code>
 
Now you can navigate from your home folder to your data folder by typing
 
<code> cd <LINK_NAME></code>
 
=== Accessing the Server - Remote Desktop ===
=== Extracting Data === 
== Submitting Scripts to the Server ==
== Transferring Results ==

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