Difference between revisions of "Using the MBNI Cluster"
From Bridges Lab Protocols
Davebridges (Talk | contribs) (added qstat/qhost/qsub/qdel commands) |
Davebridges (Talk | contribs) (added command to specify RAM minimum for a submitted job) |
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From within the current working directory | From within the current working directory | ||
<pre>qsub -cwd ./scriptname.sh</pre> | <pre>qsub -cwd ./scriptname.sh</pre> | ||
| + | To specify the minimum RAM of the computer to which the job is assigned use (for >70G): | ||
| + | <pre>qsub -l vf=70G -cwd ./scriptname.sh</pre> | ||
==Find Jobs Running== | ==Find Jobs Running== | ||
Latest revision as of 21:01, 3 October 2012
Job Submission
From within the current working directory
qsub -cwd ./scriptname.sh
To specify the minimum RAM of the computer to which the job is assigned use (for >70G):
qsub -l vf=70G -cwd ./scriptname.sh
Find Jobs Running
To find all jobs you are running:
qstat
To find all jobs running, and which computer they are running on
qhost -j
Deleting a Job
Find the job-ID using qstat
qdel <job-ID>
