Search results
From Bridges Lab Protocols
Jump to navigationJump to search
Page title matches
- ...ormalized Cp value. This converts the Cp values into arbitrary normalized expression values. * Divide all the arbitrary normalized expression values by the control average. This will set the control group to average ...2 KB (250 words) - 14:57, 2 December 2013
Page text matches
- ===Setting up Tissue Specific shRNA Expression Experiment=== ...1 KB (218 words) - 14:51, 30 November 2012
- ...to the lumi data frame. Phenotype data can be accessed by pData(lumi) and expression data can be accessed by exprs(lumi). ==Differential Expression Analysis== ...5 KB (722 words) - 15:34, 2 September 2009
- ...ormalized Cp value. This converts the Cp values into arbitrary normalized expression values. * Divide all the arbitrary normalized expression values by the control average. This will set the control group to average ...2 KB (250 words) - 14:57, 2 December 2013
- ...the BSData dataframe. Phenotype data can be accessed by pData(BSData) and expression data can be accessed by exprs(BSData). ==Differential Expression Analysis== ...5 KB (766 words) - 15:34, 2 September 2009
- ...for eukaryotic expression: GCCACCATGG) or Shine-Dalgarno (for prokaryotic expression) sequence between the 5' restriction site and the complementary sequence (b ...2 KB (247 words) - 20:19, 5 May 2009
- # Input: expression matrix, chip environments # output: heatmaps of all the pathways for all the genes in expression matrix ...3 KB (406 words) - 15:35, 2 September 2009
- [[ Category: Expression ]] ...687 bytes (92 words) - 18:59, 29 January 2017
- eset <- GDS2eSet(gds, do.log=TRUE) #convert to expression set, by default obtains annotation (GPL) data with log2 transformation eset.norm <- normalize.ExpressionSet.quantiles(eset) #normalize expression set by quantile method ...2 KB (354 words) - 15:34, 2 September 2009
- [[ Category: Gene Expression ]] ...1 KB (234 words) - 18:52, 30 December 2014
- [[ Category: Expression ]] ...2 KB (306 words) - 16:49, 4 December 2018
- [[ Category: Expression ]] ...2 KB (334 words) - 19:17, 18 December 2018
- * You should have a list of all analysed genes, sorted be gene expression changes (log fold change or fold change) from highest differentially expres ...3 KB (434 words) - 13:31, 5 September 2018
- • Taqman Gene Expression Assay Primers stored at -20 ...2 KB (302 words) - 15:16, 10 May 2017
- [[Category:Expression]] ...3 KB (423 words) - 00:42, 29 March 2011
- * The SYBR Green-based real-time PCR was performed to quantify miRNA expression, and U6 can be used for normalization. ...3 KB (432 words) - 15:24, 1 March 2017
- ...cells were harvested, washed in distilled water, and induced for invertase expression by resuspension in YPUAT(low D)S medium (containing 0.05% glucose and 2% su ...3 KB (492 words) - 23:36, 18 July 2010
- [[Category:Expression]] ...3 KB (478 words) - 20:51, 22 October 2018
- [[ Category: Expression ]] ...4 KB (585 words) - 19:13, 8 November 2023