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RNA-seq Pipeline for Known Transcripts

4 bytes removed, 13:31, 21 October 2011
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* Example command where s_2_100.txt is the original file, mybarcodes.txt is the barcode file, 2 mismatches are allowed (default is 1). This will generate files /tmp/bla_BC#.txt:
<pre>
cat s_2_100.txt | /usr/local/bin/fastx_barcode_splitter.pl --bcfile mybarcodes.txt --bol --mismatches 2 \ --prefix /tmp/bla_ --suffix ".txt"
</pre>
# Filter for quality, if applicable

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