Using Bioconductor To Analyse Microarray Data: Difference between revisions
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**measurements - '''GSM''' | **measurements - '''GSM''' | ||
**platforms - '''GPL''' | **platforms - '''GPL''' | ||
**series - '''GSE''' | **series - '''GSE''' | ||
<pre> | <pre> | ||
gds <- getGEO("GDS162") #load GDS162 dataset | gds <- getGEO("GDS162") #load GDS162 dataset | ||
eset <- GDS2eset(gds) #convert to expression set | eset <- GDS2eset(gds) #convert to expression set | ||
</pre> | </pre> | ||
*see [http://www2.warwick.ac.uk/fac/sci/moac/currentstudents/peter_cock/r/geo/] or [http://www.bioconductor.org/packages/1.8/bioc/html/GEOquery.html] for more information. | *see [[http://www2.warwick.ac.uk/fac/sci/moac/currentstudents/peter_cock/r/geo/ Peter Cock's Page]] or [[http://www.bioconductor.org/packages/1.8/bioc/html/GEOquery.html GEOquery Documentation]] for more information. | ||