Using Bioconductor To Analyse Microarray Data: Difference between revisions

Line 20: Line 20:
library(GEOquery)
library(GEOquery)
</pre>
</pre>
*Load data (can load:
*Can load:
**datasets - '''GDS'''
**datasets - '''GDS'''
**measurements - '''GSM'''
**measurements - '''GSM'''
Line 28: Line 28:
gds <- getGEO("GDS162")  #load GDS162 dataset
gds <- getGEO("GDS162")  #load GDS162 dataset
</pre>
</pre>
*see [[http://www2.warwick.ac.uk/fac/sci/moac/currentstudents/peter_cock/r/geo/]] or [[http://www.bioconductor.org/packages/1.8/bioc/html/GEOquery.html]] for more information