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==Programs Required==
*Pymol http://pymol.sourceforge.net/
*APBS http://sourceforge.net/projects/apbs/this may require a linux box (or can install via Cygwin)
===Generate PQR and PX Files for the Structure===
#Go to plugin -> apbs tools -> visualization.
#Go to the visualization tab.
#Under molecular surface click '''Color by potential on sol. accesible surface'''.#Click on show and adjust settings to -10kV to 10kV and press show again. You may need to adjust these settings again depending on the charge state of your molecule..
[[Category: Structures]]
[[Category: PyMol]]
[[Category: Bioinformatics]]